Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.25□□□□□ -0.45
Abca1P41233 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.25□□□□□ -0.45
Abca1P41233 Mir7684-201ENSMUST00000183858 60 ntBASIC12.25□□□□□ -0.45
Abca1P41233 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.25□□□□□ -0.45
Abca1P41233 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.25□□□□□ -0.45
Abca1P41233 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.25□□□□□ -0.45
Abca1P41233 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Gm25857-201ENSMUST00000082788 129 ntBASIC12.25□□□□□ -0.45
Abca1P41233 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abca1P41233 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Abca1P41233 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.24□□□□□ -0.45
Abca1P41233 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.24□□□□□ -0.45
Abca1P41233 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.24□□□□□ -0.45
Abca1P41233 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Abca1P41233 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Gm13015-201ENSMUST00000118674 204 ntBASIC12.24□□□□□ -0.45
Abca1P41233 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.24□□□□□ -0.45
Abca1P41233 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.24□□□□□ -0.45
Abca1P41233 Mir8102-201ENSMUST00000184148 139 ntBASIC12.24□□□□□ -0.45
Abca1P41233 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Abca1P41233 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.24□□□□□ -0.45
Abca1P41233 Gm9794-201ENSMUST00000202370 423 ntBASIC12.24□□□□□ -0.45
Abca1P41233 Gm44855-201ENSMUST00000205725 362 ntBASIC12.24□□□□□ -0.45
Abca1P41233 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.24□□□□□ -0.45
Abca1P41233 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.24□□□□□ -0.45
Abca1P41233 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Abca1P41233 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.24□□□□□ -0.45
Abca1P41233 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Abca1P41233 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Abca1P41233 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abca1P41233 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Abca1P41233 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Abca1P41233 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Abca1P41233 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.23□□□□□ -0.45
Abca1P41233 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.23□□□□□ -0.45
Abca1P41233 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.23□□□□□ -0.45
Abca1P41233 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Abca1P41233 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.23□□□□□ -0.45
Abca1P41233 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Abca1P41233 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Abca1P41233 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.23□□□□□ -0.45
Abca1P41233 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Abca1P41233 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Abca1P41233 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abca1P41233 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms