Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
Sox5P35710 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.07■□□□□ 0.16
Sox5P35710 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sox5P35710 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.06■□□□□ 0.16
Sox5P35710 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.06■□□□□ 0.16
Sox5P35710 Gm8749-201ENSMUST00000117737 331 ntBASIC16.06■□□□□ 0.16
Sox5P35710 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Sox5P35710 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
Sox5P35710 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox5P35710 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Sox5P35710 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sox5P35710 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Sox5P35710 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Gm7230-201ENSMUST00000173026 815 ntBASIC16.05■□□□□ 0.16
Sox5P35710 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sox5P35710 Gm4899-201ENSMUST00000178708 719 ntBASIC16.05■□□□□ 0.16
Sox5P35710 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Sox5P35710 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.05■□□□□ 0.16
Sox5P35710 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox5P35710 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox5P35710 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sox5P35710 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox5P35710 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox5P35710 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox5P35710 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox5P35710 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sox5P35710 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.04■□□□□ 0.16
Sox5P35710 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.04■□□□□ 0.16
Sox5P35710 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox5P35710 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.04■□□□□ 0.16
Sox5P35710 Gm9726-201ENSMUST00000180321 678 ntBASIC16.04■□□□□ 0.16
Sox5P35710 Gm6550-201ENSMUST00000187574 993 ntBASIC16.04■□□□□ 0.16
Sox5P35710 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.04■□□□□ 0.16
Sox5P35710 Gm6376-201ENSMUST00000209407 580 ntBASIC16.04■□□□□ 0.16
Sox5P35710 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox5P35710 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox5P35710 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Sox5P35710 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox5P35710 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sox5P35710 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox5P35710 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sox5P35710 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Sox5P35710 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.04■□□□□ 0.16
Sox5P35710 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox5P35710 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox5P35710 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Sox5P35710 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox5P35710 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox5P35710 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Sox5P35710 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Sox5P35710 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox5P35710 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sox5P35710 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox5P35710 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox5P35710 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox5P35710 Gm15173-201ENSMUST00000122049 433 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms