Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.61□□□□□ -0.23
Foxa1P35582 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxa1P35582 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.6□□□□□ -0.23
Foxa1P35582 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Foxa1P35582 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Foxa1P35582 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Foxa1P35582 Gm8749-201ENSMUST00000117737 331 ntBASIC13.6□□□□□ -0.23
Foxa1P35582 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.6□□□□□ -0.23
Foxa1P35582 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Foxa1P35582 Gm9726-201ENSMUST00000180321 678 ntBASIC13.6□□□□□ -0.23
Foxa1P35582 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.6□□□□□ -0.23
Foxa1P35582 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.6□□□□□ -0.23
Foxa1P35582 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Foxa1P35582 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxa1P35582 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Foxa1P35582 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Foxa1P35582 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Foxa1P35582 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.59□□□□□ -0.23
Foxa1P35582 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Foxa1P35582 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Foxa1P35582 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.59□□□□□ -0.23
Foxa1P35582 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Foxa1P35582 Gm14822-201ENSMUST00000122247 291 ntBASIC13.59□□□□□ -0.23
Foxa1P35582 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.59□□□□□ -0.23
Foxa1P35582 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
Foxa1P35582 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.59□□□□□ -0.23
Foxa1P35582 Gm24513-201ENSMUST00000174964 138 ntBASIC13.59□□□□□ -0.23
Foxa1P35582 Gm27397-201ENSMUST00000184997 107 ntBASIC13.59□□□□□ -0.23
Foxa1P35582 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.59□□□□□ -0.23
Foxa1P35582 Gm45612-201ENSMUST00000211320 160 ntBASIC13.59□□□□□ -0.23
Foxa1P35582 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Foxa1P35582 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Foxa1P35582 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxa1P35582 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Foxa1P35582 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Foxa1P35582 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Foxa1P35582 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Foxa1P35582 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Foxa1P35582 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Foxa1P35582 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Foxa1P35582 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxa1P35582 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxa1P35582 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxa1P35582 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Foxa1P35582 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxa1P35582 Gm6973-201ENSMUST00000117080 721 ntBASIC13.58□□□□□ -0.24
Foxa1P35582 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.58□□□□□ -0.24
Foxa1P35582 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.58□□□□□ -0.24
Foxa1P35582 Gm2451-201ENSMUST00000199447 999 ntBASIC13.58□□□□□ -0.24
Foxa1P35582 Gm10290-201ENSMUST00000200451 999 ntBASIC13.58□□□□□ -0.24
Foxa1P35582 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Foxa1P35582 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.58□□□□□ -0.24
Foxa1P35582 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Foxa1P35582 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.58□□□□□ -0.24
Foxa1P35582 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.58□□□□□ -0.24
Foxa1P35582 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.58□□□□□ -0.24
Foxa1P35582 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxa1P35582 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxa1P35582 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.58□□□□□ -0.24
Foxa1P35582 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxa1P35582 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Foxa1P35582 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxa1P35582 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms