Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
P06344 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
P06344 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Gm11543-201ENSMUST00000120758 370 ntBASIC13.1□□□□□ -0.31
P06344 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.1□□□□□ -0.31
P06344 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.1□□□□□ -0.31
P06344 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
P06344 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
P06344 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P06344 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
P06344 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
P06344 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
P06344 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.09□□□□□ -0.31
P06344 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.09□□□□□ -0.31
P06344 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.09□□□□□ -0.31
P06344 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.09□□□□□ -0.31
P06344 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.09□□□□□ -0.31
P06344 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.09□□□□□ -0.31
P06344 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
P06344 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.09□□□□□ -0.31
P06344 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P06344 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
P06344 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
P06344 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
P06344 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
P06344 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
P06344 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
P06344 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
P06344 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.08□□□□□ -0.32
P06344 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
P06344 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.08□□□□□ -0.32
P06344 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Gm18737-201ENSMUST00000173594 937 ntBASIC13.08□□□□□ -0.32
P06344 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
P06344 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.08□□□□□ -0.32
P06344 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.08□□□□□ -0.32
P06344 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
P06344 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
P06344 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.08□□□□□ -0.32
P06344 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P06344 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P06344 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P06344 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P06344 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P06344 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms