Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hcn1O88704 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Hcn1O88704 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.1□□□□□ -0.15
Hcn1O88704 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Hcn1O88704 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Hcn1O88704 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.1□□□□□ -0.15
Hcn1O88704 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.1□□□□□ -0.15
Hcn1O88704 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.1□□□□□ -0.15
Hcn1O88704 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Hcn1O88704 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Hcn1O88704 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.1□□□□□ -0.15
Hcn1O88704 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.1□□□□□ -0.15
Hcn1O88704 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Hcn1O88704 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.1□□□□□ -0.15
Hcn1O88704 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hcn1O88704 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Hcn1O88704 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.09□□□□□ -0.15
Hcn1O88704 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Hcn1O88704 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn1O88704 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hcn1O88704 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hcn1O88704 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hcn1O88704 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.08□□□□□ -0.15
Hcn1O88704 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hcn1O88704 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hcn1O88704 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hcn1O88704 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.08□□□□□ -0.16
Hcn1O88704 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Hcn1O88704 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.08□□□□□ -0.16
Hcn1O88704 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Hcn1O88704 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Hcn1O88704 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 Gm5264-201ENSMUST00000190584 848 ntBASIC14.08□□□□□ -0.16
Hcn1O88704 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Hcn1O88704 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hcn1O88704 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn1O88704 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hcn1O88704 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn1O88704 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms