Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4lE9Q2N0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4lE9Q2N0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4lE9Q2N0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cpsf4lE9Q2N0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cpsf4lE9Q2N0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4lE9Q2N0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Gm11745-201ENSMUST00000121669 448 ntBASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Gm14822-201ENSMUST00000122247 291 ntBASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Gm27920-201ENSMUST00000183953 96 ntBASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4lE9Q2N0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Gm24513-201ENSMUST00000174964 138 ntBASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Gm27494-201ENSMUST00000184735 189 ntBASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4lE9Q2N0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.42□□□□□ -0.42
Cpsf4lE9Q2N0 Gm5479-201ENSMUST00000160578 435 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms