Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Gm28043E0CXC2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Gm18195-201ENSMUST00000207604 706 ntBASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm28043E0CXC2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.76□□□□□ -0.05
Gm28043E0CXC2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28043E0CXC2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Gm11764-201ENSMUST00000120221 623 ntBASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Gm15173-201ENSMUST00000122049 433 ntBASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Gm6550-201ENSMUST00000187574 993 ntBASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Gm28043E0CXC2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms