Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Gm9182-201ENSMUST00000217829 639 ntBASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clrn2B2RVW2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clrn2B2RVW2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.96■□□□□ 0.3
Clrn2B2RVW2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clrn2B2RVW2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Clrn2B2RVW2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Gm9797-201ENSMUST00000052902 613 ntBASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clrn2B2RVW2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Gm11478-201ENSMUST00000117851 599 ntBASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Gm28760-201ENSMUST00000185995 736 ntBASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Gm37917-201ENSMUST00000194711 392 ntBASIC16.94■□□□□ 0.3
Clrn2B2RVW2 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.94■□□□□ 0.3
Clrn2B2RVW2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms