Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Gm15653-201ENSMUST00000119247 907 ntBASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Gm6222-201ENSMUST00000120787 396 ntBASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Gm27989-201ENSMUST00000184721 107 ntBASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcb1Q9Z0H3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Gm44344-201ENSMUST00000200287 129 ntBASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smarcb1Q9Z0H3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcb1Q9Z0H3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms