Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.57□□□□□ -0.24
ClcnkaQ9WUB7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Gm9727-201ENSMUST00000161387 555 ntBASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
ClcnkaQ9WUB7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
ClcnkaQ9WUB7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms