Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atp6ap1Q9R1Q9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Gm10175-201ENSMUST00000086013 645 ntBASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atp6ap1Q9R1Q9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Gm13464-201ENSMUST00000119418 935 ntBASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atp6ap1Q9R1Q9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atp6ap1Q9R1Q9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atp6ap1Q9R1Q9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atp6ap1Q9R1Q9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Atp6ap1Q9R1Q9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atp6ap1Q9R1Q9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atp6ap1Q9R1Q9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atp6ap1Q9R1Q9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atp6ap1Q9R1Q9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atp6ap1Q9R1Q9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms