Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Gm44367-201ENSMUST00000196836 138 ntBASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Gm44350-201ENSMUST00000197197 138 ntBASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Gm44390-201ENSMUST00000197533 144 ntBASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Gm44313-201ENSMUST00000198018 138 ntBASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Gm44486-201ENSMUST00000198508 138 ntBASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Gm44314-201ENSMUST00000199263 138 ntBASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Gm44394-201ENSMUST00000199558 138 ntBASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Gm44484-201ENSMUST00000199873 138 ntBASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Gm44466-201ENSMUST00000200264 138 ntBASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Gm44359-201ENSMUST00000200671 138 ntBASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfwd2Q9R1A8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Gm11780-201ENSMUST00000136880 516 ntBASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Gm27459-201ENSMUST00000184860 107 ntBASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Gm43347-201ENSMUST00000200226 580 ntBASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfwd2Q9R1A8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Gm15358-201ENSMUST00000119249 520 ntBASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.16■□□□□ 0.02
Rfwd2Q9R1A8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rfwd2Q9R1A8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms