Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Gm11025-201ENSMUST00000140773 466 ntBASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.37□□□□□ -0.27
Clcf1Q9QZM3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Gm9385-201ENSMUST00000117563 472 ntBASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Rpph1-201ENSMUST00000175096 319 ntBASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.36□□□□□ -0.27
Clcf1Q9QZM3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clcf1Q9QZM3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms