Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Chd1lQ9CXF7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Chd1lQ9CXF7 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.64■□□□□ 0.26
Chd1lQ9CXF7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Chd1lQ9CXF7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd1lQ9CXF7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd1lQ9CXF7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 Gm43364-201ENSMUST00000196046 3274 ntBASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Chd1lQ9CXF7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms