Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sft2d3Q9CSV6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sft2d3Q9CSV6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sft2d3Q9CSV6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sft2d3Q9CSV6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Sft2d3Q9CSV6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Gm23935-201ENSMUST00000102303 57 ntBASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Gm24270-201ENSMUST00000102326 57 ntBASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Gm24245-201ENSMUST00000157318 57 ntBASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Gm8318-201ENSMUST00000182954 872 ntBASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Gm18246-201ENSMUST00000221023 728 ntBASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sft2d3Q9CSV6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sft2d3Q9CSV6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms