Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.92□□□□□ -0.34
Scrt1Q99M85 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Gm13453-201ENSMUST00000118708 357 ntBASIC12.92□□□□□ -0.34
Scrt1Q99M85 Gm16215-201ENSMUST00000161990 637 ntBASIC12.92□□□□□ -0.34
Scrt1Q99M85 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Gm8318-201ENSMUST00000182954 872 ntBASIC12.92□□□□□ -0.34
Scrt1Q99M85 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Gm2272-201ENSMUST00000194903 582 ntBASIC12.92□□□□□ -0.34
Scrt1Q99M85 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Gm7730-201ENSMUST00000212486 454 ntBASIC12.92□□□□□ -0.34
Scrt1Q99M85 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.92□□□□□ -0.34
Scrt1Q99M85 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.92□□□□□ -0.34
Scrt1Q99M85 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Gm44855-201ENSMUST00000205725 362 ntBASIC12.91□□□□□ -0.34
Scrt1Q99M85 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.91□□□□□ -0.34
Scrt1Q99M85 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.91□□□□□ -0.34
Scrt1Q99M85 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.91□□□□□ -0.34
Scrt1Q99M85 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.91□□□□□ -0.34
Scrt1Q99M85 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scrt1Q99M85 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Gm15487-201ENSMUST00000122373 465 ntBASIC12.9□□□□□ -0.34
Scrt1Q99M85 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scrt1Q99M85 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.9□□□□□ -0.34
Scrt1Q99M85 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scrt1Q99M85 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms