Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Gm27702-201ENSMUST00000184512 56 ntBASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Gm27494-201ENSMUST00000184735 189 ntBASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.02■□□□□ 0.48
Sf3a1Q8K4Z5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sf3a1Q8K4Z5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sf3a1Q8K4Z5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Sf3a1Q8K4Z5 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Gm13464-201ENSMUST00000119418 935 ntBASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Gm15483-201ENSMUST00000120338 456 ntBASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sf3a1Q8K4Z5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Gm37305-201ENSMUST00000195714 4279 ntBASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Tcf21-202ENSMUST00000218002 1788 ntBASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Gm6973-201ENSMUST00000117080 721 ntBASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Gm11745-201ENSMUST00000121669 448 ntBASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Camk2g-217ENSMUST00000226630 1937 ntBASIC18■□□□□ 0.47
Sf3a1Q8K4Z5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Gm8749-201ENSMUST00000117737 331 ntBASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Mir1895-201ENSMUST00000122615 79 ntBASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Gm6736-201ENSMUST00000166583 948 ntBASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Sf3a1Q8K4Z5 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms