Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Zswim3Q8CFL8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Zswim3Q8CFL8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.07■□□□□ 0.16
Zswim3Q8CFL8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Zswim3Q8CFL8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zswim3Q8CFL8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zswim3Q8CFL8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zswim3Q8CFL8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zswim3Q8CFL8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.07■□□□□ 0.16
Zswim3Q8CFL8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zswim3Q8CFL8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zswim3Q8CFL8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Zswim3Q8CFL8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Gm5356-201ENSMUST00000093326 615 ntBASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zswim3Q8CFL8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Mir125a-201ENSMUST00000083545 68 ntBASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zswim3Q8CFL8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Zswim3Q8CFL8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Zswim3Q8CFL8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zswim3Q8CFL8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zswim3Q8CFL8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms