Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim9Q8C7M3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Gm14494-201ENSMUST00000118786 435 ntBASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Gm15467-201ENSMUST00000120582 445 ntBASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Gm20553-201ENSMUST00000204205 844 ntBASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Gm10175-201ENSMUST00000086013 645 ntBASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim9Q8C7M3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Gm15483-201ENSMUST00000120338 456 ntBASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.22■□□□□ 0.19
Trim9Q8C7M3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim9Q8C7M3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms