Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Gm45747-201ENSMUST00000212203 999 ntBASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.32■□□□□ 0.2
Rab11fip4Q8BQP8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Thap2-203ENSMUST00000218989 527 ntBASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Gm8396-201ENSMUST00000057361 823 ntBASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab11fip4Q8BQP8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rab11fip4Q8BQP8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms