Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.01□□□□□ -0.17
Trim45Q6PFY8 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim45Q6PFY8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14□□□□□ -0.17
Trim45Q6PFY8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim45Q6PFY8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim45Q6PFY8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim45Q6PFY8 Gm8318-201ENSMUST00000182954 872 ntBASIC14□□□□□ -0.17
Trim45Q6PFY8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14□□□□□ -0.17
Trim45Q6PFY8 Gm43575-201ENSMUST00000196420 516 ntBASIC14□□□□□ -0.17
Trim45Q6PFY8 AC160980.1-201ENSMUST00000224136 970 ntBASIC14□□□□□ -0.17
Trim45Q6PFY8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Trim45Q6PFY8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim45Q6PFY8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim45Q6PFY8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Gm13597-201ENSMUST00000121239 375 ntBASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
Trim45Q6PFY8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim45Q6PFY8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Gm23935-201ENSMUST00000102303 57 ntBASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Gm24270-201ENSMUST00000102326 57 ntBASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.98□□□□□ -0.17
Trim45Q6PFY8 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Gm24245-201ENSMUST00000157318 57 ntBASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim45Q6PFY8 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms