Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Clcn4Q61418 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn4Q61418 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Clcn4Q61418 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Clcn4Q61418 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Gm12260-201ENSMUST00000122447 411 ntBASIC13.59□□□□□ -0.23
Clcn4Q61418 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.59□□□□□ -0.23
Clcn4Q61418 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.59□□□□□ -0.23
Clcn4Q61418 Gm37153-201ENSMUST00000193637 231 ntBASIC13.59□□□□□ -0.23
Clcn4Q61418 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.59□□□□□ -0.23
Clcn4Q61418 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.59□□□□□ -0.23
Clcn4Q61418 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.59□□□□□ -0.23
Clcn4Q61418 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.59□□□□□ -0.23
Clcn4Q61418 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Clcn4Q61418 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn4Q61418 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.59□□□□□ -0.23
Clcn4Q61418 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Clcn4Q61418 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Clcn4Q61418 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clcn4Q61418 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clcn4Q61418 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clcn4Q61418 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Clcn4Q61418 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clcn4Q61418 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clcn4Q61418 Gm14140-201ENSMUST00000119999 995 ntBASIC13.58□□□□□ -0.24
Clcn4Q61418 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.58□□□□□ -0.24
Clcn4Q61418 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.58□□□□□ -0.24
Clcn4Q61418 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clcn4Q61418 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clcn4Q61418 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.58□□□□□ -0.24
Clcn4Q61418 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clcn4Q61418 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clcn4Q61418 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clcn4Q61418 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clcn4Q61418 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.58□□□□□ -0.24
Clcn4Q61418 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clcn4Q61418 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clcn4Q61418 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clcn4Q61418 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Clcn4Q61418 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Clcn4Q61418 Gm13036-201ENSMUST00000117799 748 ntBASIC13.57□□□□□ -0.24
Clcn4Q61418 Gm11779-201ENSMUST00000118541 368 ntBASIC13.57□□□□□ -0.24
Clcn4Q61418 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.57□□□□□ -0.24
Clcn4Q61418 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.57□□□□□ -0.24
Clcn4Q61418 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.57□□□□□ -0.24
Clcn4Q61418 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Clcn4Q61418 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Clcn4Q61418 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.57□□□□□ -0.24
Clcn4Q61418 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Clcn4Q61418 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Clcn4Q61418 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clcn4Q61418 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.57□□□□□ -0.24
Clcn4Q61418 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.57□□□□□ -0.24
Clcn4Q61418 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.56□□□□□ -0.24
Clcn4Q61418 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Clcn4Q61418 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clcn4Q61418 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms