Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.3□□□□□ -0.12
Col12a1Q60847 Gm38266-201ENSMUST00000194931 421 ntBASIC14.3□□□□□ -0.12
Col12a1Q60847 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.3□□□□□ -0.12
Col12a1Q60847 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col12a1Q60847 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col12a1Q60847 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col12a1Q60847 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col12a1Q60847 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col12a1Q60847 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col12a1Q60847 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col12a1Q60847 Gm19078-201ENSMUST00000206311 727 ntBASIC14.3□□□□□ -0.12
Col12a1Q60847 Gm8598-201ENSMUST00000221184 836 ntBASIC14.3□□□□□ -0.12
Col12a1Q60847 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.3□□□□□ -0.12
Col12a1Q60847 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col12a1Q60847 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col12a1Q60847 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col12a1Q60847 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col12a1Q60847 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col12a1Q60847 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Col12a1Q60847 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.29□□□□□ -0.12
Col12a1Q60847 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Col12a1Q60847 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.29□□□□□ -0.12
Col12a1Q60847 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.29□□□□□ -0.12
Col12a1Q60847 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.29□□□□□ -0.12
Col12a1Q60847 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.29□□□□□ -0.12
Col12a1Q60847 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.29□□□□□ -0.12
Col12a1Q60847 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.29□□□□□ -0.12
Col12a1Q60847 Gm38158-201ENSMUST00000194617 339 ntBASIC14.29□□□□□ -0.12
Col12a1Q60847 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.29□□□□□ -0.12
Col12a1Q60847 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.29□□□□□ -0.12
Col12a1Q60847 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col12a1Q60847 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col12a1Q60847 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.28□□□□□ -0.12
Col12a1Q60847 Gm38341-201ENSMUST00000195357 515 ntBASIC14.28□□□□□ -0.12
Col12a1Q60847 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.28□□□□□ -0.12
Col12a1Q60847 Gm9182-201ENSMUST00000217829 639 ntBASIC14.28□□□□□ -0.12
Col12a1Q60847 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col12a1Q60847 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.28□□□□□ -0.12
Col12a1Q60847 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Col12a1Q60847 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col12a1Q60847 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col12a1Q60847 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col12a1Q60847 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col12a1Q60847 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col12a1Q60847 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Col12a1Q60847 Gm29787-201ENSMUST00000222129 849 ntBASIC14.28□□□□□ -0.12
Col12a1Q60847 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.28□□□□□ -0.12
Col12a1Q60847 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col12a1Q60847 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col12a1Q60847 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.28□□□□□ -0.12
Col12a1Q60847 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col12a1Q60847 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col12a1Q60847 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col12a1Q60847 Gm13342-201ENSMUST00000121055 207 ntBASIC14.28□□□□□ -0.12
Col12a1Q60847 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.28□□□□□ -0.12
Col12a1Q60847 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.28□□□□□ -0.12
Col12a1Q60847 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.28□□□□□ -0.12
Col12a1Q60847 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.28□□□□□ -0.12
Col12a1Q60847 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col12a1Q60847 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col12a1Q60847 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Col12a1Q60847 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col12a1Q60847 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col12a1Q60847 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col12a1Q60847 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col12a1Q60847 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Col12a1Q60847 Celf4-206ENSMUST00000224553 1729 ntBASIC14.27□□□□□ -0.12
Col12a1Q60847 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Col12a1Q60847 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col12a1Q60847 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.27□□□□□ -0.12
Col12a1Q60847 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.27□□□□□ -0.12
Col12a1Q60847 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col12a1Q60847 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.27□□□□□ -0.12
Col12a1Q60847 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.27□□□□□ -0.12
Col12a1Q60847 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col12a1Q60847 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col12a1Q60847 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col12a1Q60847 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col12a1Q60847 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.27□□□□□ -0.13
Col12a1Q60847 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col12a1Q60847 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col12a1Q60847 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col12a1Q60847 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col12a1Q60847 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col12a1Q60847 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms