Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc2Q4U2R1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc2Q4U2R1 Gm16401-202ENSMUST00000197463 2074 ntBASIC8.55□□□□□ -1.04
Herc2Q4U2R1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc2Q4U2R1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Herc2Q4U2R1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Herc2Q4U2R1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc2Q4U2R1 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC8.55□□□□□ -1.04
Herc2Q4U2R1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC8.55□□□□□ -1.04
Herc2Q4U2R1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC8.55□□□□□ -1.04
Herc2Q4U2R1 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc2Q4U2R1 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc2Q4U2R1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Herc2Q4U2R1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc2Q4U2R1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc2Q4U2R1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Gm13886-201ENSMUST00000117876 1183 ntBASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Gm11597-201ENSMUST00000121423 964 ntBASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Gm38144-201ENSMUST00000192790 465 ntBASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Gm18393-201ENSMUST00000208349 1131 ntBASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Herc2Q4U2R1 Gm15371-201ENSMUST00000117057 784 ntBASIC8.52□□□□□ -1.04
Herc2Q4U2R1 Gm4935-201ENSMUST00000221316 1198 ntBASIC8.52□□□□□ -1.04
Herc2Q4U2R1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms