Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sox4Q06831 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox4Q06831 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.49□□□□□ -0.09
Sox4Q06831 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Sox4Q06831 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Sox4Q06831 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox4Q06831 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sox4Q06831 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox4Q06831 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox4Q06831 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Sox4Q06831 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox4Q06831 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox4Q06831 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Sox4Q06831 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Sox4Q06831 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Sox4Q06831 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.48□□□□□ -0.09
Sox4Q06831 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.48□□□□□ -0.09
Sox4Q06831 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox4Q06831 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox4Q06831 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.48□□□□□ -0.09
Sox4Q06831 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox4Q06831 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox4Q06831 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox4Q06831 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sox4Q06831 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sox4Q06831 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox4Q06831 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox4Q06831 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox4Q06831 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox4Q06831 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sox4Q06831 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Sox4Q06831 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sox4Q06831 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Gm43474-201ENSMUST00000196415 774 ntBASIC14.47□□□□□ -0.09
Sox4Q06831 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.47□□□□□ -0.09
Sox4Q06831 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Sox4Q06831 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Sox4Q06831 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox4Q06831 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.46□□□□□ -0.09
Sox4Q06831 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Sox4Q06831 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.46□□□□□ -0.09
Sox4Q06831 Gm14701-201ENSMUST00000117156 348 ntBASIC14.46□□□□□ -0.09
Sox4Q06831 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Sox4Q06831 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.46□□□□□ -0.09
Sox4Q06831 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.46□□□□□ -0.09
Sox4Q06831 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.46□□□□□ -0.09
Sox4Q06831 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 Gm2451-201ENSMUST00000199447 999 ntBASIC14.46□□□□□ -0.09
Sox4Q06831 Gm10290-201ENSMUST00000200451 999 ntBASIC14.46□□□□□ -0.09
Sox4Q06831 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.46□□□□□ -0.09
Sox4Q06831 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox4Q06831 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.46□□□□□ -0.09
Sox4Q06831 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sox4Q06831 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sox4Q06831 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox4Q06831 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms