Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sec61a1P61620 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Sec61a1P61620 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sec61a1P61620 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.99□□□□□ -0.33
Sec61a1P61620 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Sec61a1P61620 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Gm6550-201ENSMUST00000187574 993 ntBASIC12.99□□□□□ -0.33
Sec61a1P61620 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.99□□□□□ -0.33
Sec61a1P61620 Gm18206-201ENSMUST00000207027 926 ntBASIC12.99□□□□□ -0.33
Sec61a1P61620 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Grk6-207ENSMUST00000225925 2769 ntBASIC12.99□□□□□ -0.33
Sec61a1P61620 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sec61a1P61620 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sec61a1P61620 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sec61a1P61620 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sec61a1P61620 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sec61a1P61620 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.98□□□□□ -0.33
Sec61a1P61620 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sec61a1P61620 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Sec61a1P61620 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.98□□□□□ -0.33
Sec61a1P61620 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Sec61a1P61620 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sec61a1P61620 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.98□□□□□ -0.33
Sec61a1P61620 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.98□□□□□ -0.33
Sec61a1P61620 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.98□□□□□ -0.33
Sec61a1P61620 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Sec61a1P61620 Gm15590-201ENSMUST00000078419 552 ntBASIC12.98□□□□□ -0.33
Sec61a1P61620 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sec61a1P61620 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sec61a1P61620 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Sec61a1P61620 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sec61a1P61620 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.98□□□□□ -0.33
Sec61a1P61620 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.97□□□□□ -0.33
Sec61a1P61620 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.97□□□□□ -0.33
Sec61a1P61620 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.97□□□□□ -0.33
Sec61a1P61620 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a1P61620 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.97□□□□□ -0.33
Sec61a1P61620 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.97□□□□□ -0.33
Sec61a1P61620 Gm27646-201ENSMUST00000183989 110 ntBASIC12.97□□□□□ -0.33
Sec61a1P61620 Gm27525-201ENSMUST00000184465 107 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms