Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox3P53784 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox3P53784 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sox3P53784 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Sox3P53784 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox3P53784 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.14□□□□□ -0.15
Sox3P53784 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.13□□□□□ -0.15
Sox3P53784 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox3P53784 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sox3P53784 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.13□□□□□ -0.15
Sox3P53784 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox3P53784 Rpph1-201ENSMUST00000175096 319 ntBASIC14.13□□□□□ -0.15
Sox3P53784 Gm27306-201ENSMUST00000183970 107 ntBASIC14.13□□□□□ -0.15
Sox3P53784 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.13□□□□□ -0.15
Sox3P53784 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.13□□□□□ -0.15
Sox3P53784 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Sox3P53784 Thap2-203ENSMUST00000218989 527 ntBASIC14.13□□□□□ -0.15
Sox3P53784 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sox3P53784 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sox3P53784 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.13□□□□□ -0.15
Sox3P53784 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.13□□□□□ -0.15
Sox3P53784 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox3P53784 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Sox3P53784 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox3P53784 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.12□□□□□ -0.15
Sox3P53784 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox3P53784 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.12□□□□□ -0.15
Sox3P53784 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.12□□□□□ -0.15
Sox3P53784 Gm24158-201ENSMUST00000175263 71 ntBASIC14.12□□□□□ -0.15
Sox3P53784 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox3P53784 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sox3P53784 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sox3P53784 Efs-202ENSMUST00000227037 2540 ntBASIC14.12□□□□□ -0.15
Sox3P53784 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Sox3P53784 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sox3P53784 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Sox3P53784 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox3P53784 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sox3P53784 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sox3P53784 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.11□□□□□ -0.15
Sox3P53784 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox3P53784 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms