Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm11025-201ENSMUST00000140773 466 ntBASIC14.57□□□□□ -0.08
Pdx1P52946 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.57□□□□□ -0.08
Pdx1P52946 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.57□□□□□ -0.08
Pdx1P52946 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.57□□□□□ -0.08
Pdx1P52946 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pdx1P52946 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pdx1P52946 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.57□□□□□ -0.08
Pdx1P52946 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
Pdx1P52946 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.57□□□□□ -0.08
Pdx1P52946 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdx1P52946 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pdx1P52946 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdx1P52946 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdx1P52946 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pdx1P52946 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pdx1P52946 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pdx1P52946 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdx1P52946 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdx1P52946 Gm8749-201ENSMUST00000117737 331 ntBASIC14.56□□□□□ -0.08
Pdx1P52946 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.56□□□□□ -0.08
Pdx1P52946 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.56□□□□□ -0.08
Pdx1P52946 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.56□□□□□ -0.08
Pdx1P52946 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.56□□□□□ -0.08
Pdx1P52946 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pdx1P52946 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Pdx1P52946 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.56□□□□□ -0.08
Pdx1P52946 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.56□□□□□ -0.08
Pdx1P52946 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdx1P52946 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.56□□□□□ -0.08
Pdx1P52946 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Pdx1P52946 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdx1P52946 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pdx1P52946 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pdx1P52946 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdx1P52946 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdx1P52946 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pdx1P52946 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdx1P52946 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdx1P52946 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.55□□□□□ -0.08
Pdx1P52946 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.55□□□□□ -0.08
Pdx1P52946 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pdx1P52946 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.55□□□□□ -0.08
Pdx1P52946 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.55□□□□□ -0.08
Pdx1P52946 Gm45612-201ENSMUST00000211320 160 ntBASIC14.55□□□□□ -0.08
Pdx1P52946 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pdx1P52946 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.55□□□□□ -0.08
Pdx1P52946 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pdx1P52946 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.55□□□□□ -0.08
Pdx1P52946 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pdx1P52946 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.55□□□□□ -0.08
Pdx1P52946 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdx1P52946 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pdx1P52946 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Pdx1P52946 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.54□□□□□ -0.08
Pdx1P52946 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdx1P52946 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdx1P52946 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdx1P52946 Gm14822-201ENSMUST00000122247 291 ntBASIC14.54□□□□□ -0.08
Pdx1P52946 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.54□□□□□ -0.08
Pdx1P52946 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdx1P52946 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.54□□□□□ -0.08
Pdx1P52946 Gm2451-201ENSMUST00000199447 999 ntBASIC14.54□□□□□ -0.08
Pdx1P52946 Gm10290-201ENSMUST00000200451 999 ntBASIC14.54□□□□□ -0.08
Pdx1P52946 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.54□□□□□ -0.08
Pdx1P52946 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.54□□□□□ -0.08
Pdx1P52946 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms