Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Upk2P38575 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk2P38575 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Upk2P38575 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.92□□□□□ -0.34
Upk2P38575 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.92□□□□□ -0.34
Upk2P38575 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk2P38575 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.92□□□□□ -0.34
Upk2P38575 Gm45747-201ENSMUST00000212203 999 ntBASIC12.92□□□□□ -0.34
Upk2P38575 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk2P38575 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Upk2P38575 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk2P38575 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Upk2P38575 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk2P38575 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk2P38575 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk2P38575 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk2P38575 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk2P38575 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk2P38575 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.92□□□□□ -0.34
Upk2P38575 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Upk2P38575 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.91□□□□□ -0.34
Upk2P38575 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Upk2P38575 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Upk2P38575 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.91□□□□□ -0.34
Upk2P38575 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Upk2P38575 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.91□□□□□ -0.34
Upk2P38575 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.91□□□□□ -0.34
Upk2P38575 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.91□□□□□ -0.34
Upk2P38575 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.91□□□□□ -0.34
Upk2P38575 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk2P38575 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.91□□□□□ -0.34
Upk2P38575 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Upk2P38575 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.91□□□□□ -0.34
Upk2P38575 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Upk2P38575 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Upk2P38575 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Upk2P38575 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.9□□□□□ -0.34
Upk2P38575 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.9□□□□□ -0.34
Upk2P38575 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Gm9385-201ENSMUST00000117563 472 ntBASIC12.9□□□□□ -0.34
Upk2P38575 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Upk2P38575 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.9□□□□□ -0.34
Upk2P38575 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.9□□□□□ -0.34
Upk2P38575 Gm2451-201ENSMUST00000199447 999 ntBASIC12.9□□□□□ -0.34
Upk2P38575 Gm10290-201ENSMUST00000200451 999 ntBASIC12.9□□□□□ -0.34
Upk2P38575 Olfr286-202ENSMUST00000205305 969 ntBASIC12.9□□□□□ -0.34
Upk2P38575 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Upk2P38575 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.9□□□□□ -0.34
Upk2P38575 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.9□□□□□ -0.34
Upk2P38575 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk2P38575 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
Upk2P38575 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Upk2P38575 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Upk2P38575 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms