Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccl6P27784 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccl6P27784 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.49□□□□□ -0.57
Ccl6P27784 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.49□□□□□ -0.57
Ccl6P27784 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.49□□□□□ -0.57
Ccl6P27784 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ccl6P27784 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.49□□□□□ -0.57
Ccl6P27784 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.49□□□□□ -0.57
Ccl6P27784 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.49□□□□□ -0.57
Ccl6P27784 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.49□□□□□ -0.57
Ccl6P27784 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Ccl6P27784 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.49□□□□□ -0.57
Ccl6P27784 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.49□□□□□ -0.57
Ccl6P27784 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Ccl6P27784 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.49□□□□□ -0.57
Ccl6P27784 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccl6P27784 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccl6P27784 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ccl6P27784 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl6P27784 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ccl6P27784 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Ccl6P27784 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccl6P27784 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Ccl6P27784 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.48□□□□□ -0.57
Ccl6P27784 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccl6P27784 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccl6P27784 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccl6P27784 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.48□□□□□ -0.57
Ccl6P27784 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Ccl6P27784 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.48□□□□□ -0.57
Ccl6P27784 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ccl6P27784 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl6P27784 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccl6P27784 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccl6P27784 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms