Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.86□□□□□ -0.03
Chrna4O70174 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chrna4O70174 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Gm15427-201ENSMUST00000117288 531 ntBASIC14.86□□□□□ -0.03
Chrna4O70174 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.86□□□□□ -0.03
Chrna4O70174 Rpph1-201ENSMUST00000175096 319 ntBASIC14.86□□□□□ -0.03
Chrna4O70174 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.86□□□□□ -0.03
Chrna4O70174 Gm43514-201ENSMUST00000198852 424 ntBASIC14.86□□□□□ -0.03
Chrna4O70174 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.86□□□□□ -0.03
Chrna4O70174 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chrna4O70174 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chrna4O70174 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.86□□□□□ -0.03
Chrna4O70174 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chrna4O70174 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chrna4O70174 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.86□□□□□ -0.03
Chrna4O70174 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chrna4O70174 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Chrna4O70174 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Chrna4O70174 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Gm4995-201ENSMUST00000117247 432 ntBASIC14.85□□□□□ -0.03
Chrna4O70174 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.85□□□□□ -0.03
Chrna4O70174 Gm9726-201ENSMUST00000180321 678 ntBASIC14.85□□□□□ -0.03
Chrna4O70174 Gm8000-201ENSMUST00000188378 592 ntBASIC14.85□□□□□ -0.03
Chrna4O70174 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.85□□□□□ -0.03
Chrna4O70174 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.85□□□□□ -0.03
Chrna4O70174 Gm20553-201ENSMUST00000204205 844 ntBASIC14.85□□□□□ -0.03
Chrna4O70174 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Chrna4O70174 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Chrna4O70174 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.85□□□□□ -0.03
Chrna4O70174 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chrna4O70174 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Chrna4O70174 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.84□□□□□ -0.03
Chrna4O70174 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.84□□□□□ -0.03
Chrna4O70174 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.84□□□□□ -0.03
Chrna4O70174 Gm15483-201ENSMUST00000120338 456 ntBASIC14.84□□□□□ -0.03
Chrna4O70174 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.84□□□□□ -0.03
Chrna4O70174 Gm2451-201ENSMUST00000199447 999 ntBASIC14.84□□□□□ -0.03
Chrna4O70174 Gm10290-201ENSMUST00000200451 999 ntBASIC14.84□□□□□ -0.03
Chrna4O70174 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Chrna4O70174 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Chrna4O70174 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chrna4O70174 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Chrna4O70174 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Chrna4O70174 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna4O70174 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms