Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
Limk2O54785 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.93□□□□□ -0.02
Limk2O54785 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Limk2O54785 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Limk2O54785 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Limk2O54785 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.93□□□□□ -0.02
Limk2O54785 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.93□□□□□ -0.02
Limk2O54785 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Limk2O54785 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Limk2O54785 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.93□□□□□ -0.02
Limk2O54785 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.93□□□□□ -0.02
Limk2O54785 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Limk2O54785 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Limk2O54785 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.92□□□□□ -0.02
Limk2O54785 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.92□□□□□ -0.02
Limk2O54785 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Limk2O54785 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.92□□□□□ -0.02
Limk2O54785 Gm20553-201ENSMUST00000204205 844 ntBASIC14.92□□□□□ -0.02
Limk2O54785 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.92□□□□□ -0.02
Limk2O54785 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.92□□□□□ -0.02
Limk2O54785 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.92□□□□□ -0.02
Limk2O54785 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Limk2O54785 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Limk2O54785 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Limk2O54785 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.91□□□□□ -0.02
Limk2O54785 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Limk2O54785 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.91□□□□□ -0.02
Limk2O54785 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.91□□□□□ -0.02
Limk2O54785 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.91□□□□□ -0.02
Limk2O54785 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.91□□□□□ -0.02
Limk2O54785 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Limk2O54785 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.91□□□□□ -0.02
Limk2O54785 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.91□□□□□ -0.02
Limk2O54785 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Limk2O54785 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Limk2O54785 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.91□□□□□ -0.02
Limk2O54785 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.91□□□□□ -0.02
Limk2O54785 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Limk2O54785 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Limk2O54785 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Limk2O54785 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Limk2O54785 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Limk2O54785 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Limk2O54785 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Limk2O54785 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Limk2O54785 Carlr-201ENSMUST00000181515 2574 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms