Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm2272-201ENSMUST00000194903 582 ntBASIC13.66□□□□□ -0.22
Capn1O35350 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.66□□□□□ -0.22
Capn1O35350 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.66□□□□□ -0.22
Capn1O35350 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.66□□□□□ -0.22
Capn1O35350 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Capn1O35350 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.66□□□□□ -0.22
Capn1O35350 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Capn1O35350 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.66□□□□□ -0.22
Capn1O35350 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Capn1O35350 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.66□□□□□ -0.22
Capn1O35350 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.66□□□□□ -0.22
Capn1O35350 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capn1O35350 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capn1O35350 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capn1O35350 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capn1O35350 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Capn1O35350 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capn1O35350 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.65□□□□□ -0.22
Capn1O35350 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Capn1O35350 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.65□□□□□ -0.22
Capn1O35350 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Capn1O35350 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.65□□□□□ -0.22
Capn1O35350 Mir6956-201ENSMUST00000183598 62 ntBASIC13.65□□□□□ -0.22
Capn1O35350 Mir6990-201ENSMUST00000183724 91 ntBASIC13.65□□□□□ -0.22
Capn1O35350 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.65□□□□□ -0.22
Capn1O35350 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capn1O35350 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capn1O35350 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.65□□□□□ -0.22
Capn1O35350 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Capn1O35350 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capn1O35350 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.65□□□□□ -0.22
Capn1O35350 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capn1O35350 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capn1O35350 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.65□□□□□ -0.22
Capn1O35350 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capn1O35350 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Capn1O35350 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Capn1O35350 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Capn1O35350 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Capn1O35350 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Capn1O35350 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.64□□□□□ -0.23
Capn1O35350 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.64□□□□□ -0.23
Capn1O35350 BC037039-201ENSMUST00000192003 2205 ntBASIC13.64□□□□□ -0.23
Capn1O35350 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.64□□□□□ -0.23
Capn1O35350 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.64□□□□□ -0.23
Capn1O35350 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.64□□□□□ -0.23
Capn1O35350 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Capn1O35350 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Gm13616-201ENSMUST00000120600 222 ntBASIC13.64□□□□□ -0.23
Capn1O35350 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.64□□□□□ -0.23
Capn1O35350 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.64□□□□□ -0.23
Capn1O35350 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Capn1O35350 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Capn1O35350 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Capn1O35350 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Capn1O35350 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Capn1O35350 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.63□□□□□ -0.23
Capn1O35350 Rprl2-201ENSMUST00000157150 290 ntBASIC13.63□□□□□ -0.23
Capn1O35350 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Capn1O35350 Gm18889-201ENSMUST00000174284 929 ntBASIC13.63□□□□□ -0.23
Capn1O35350 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.63□□□□□ -0.23
Capn1O35350 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms