Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Gm12882-201ENSMUST00000121696 517 ntBASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Mir7654-201ENSMUST00000185082 70 ntBASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
B020004C17RikJ3QP07 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
B020004C17RikJ3QP07 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
B020004C17RikJ3QP07 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
B020004C17RikJ3QP07 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
B020004C17RikJ3QP07 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.33■□□□□ 0.21
B020004C17RikJ3QP07 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
B020004C17RikJ3QP07 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Gm4804-201ENSMUST00000182234 999 ntBASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Gm5279-201ENSMUST00000199575 745 ntBASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
B020004C17RikJ3QP07 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Gm21470-201ENSMUST00000187680 696 ntBASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Gm5425-201ENSMUST00000214125 459 ntBASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
B020004C17RikJ3QP07 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Gm15678-201ENSMUST00000117573 960 ntBASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 AY702102-202ENSMUST00000194651 1173 ntBASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
B020004C17RikJ3QP07 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms