Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh1F7BJK1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh1F7BJK1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh1F7BJK1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh1F7BJK1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh1F7BJK1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Gm18489-201ENSMUST00000172565 551 ntBASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Ank2-226ENSMUST00000189368 339 ntBASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh1F7BJK1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Gm12644-201ENSMUST00000119935 606 ntBASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Gm44487-201ENSMUST00000205145 325 ntBASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdh1F7BJK1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh1F7BJK1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms