Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim30cD3YVI9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim30cD3YVI9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim30cD3YVI9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trim30cD3YVI9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim30cD3YVI9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim30cD3YVI9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Gm11764-201ENSMUST00000120221 623 ntBASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Gm27628-201ENSMUST00000184911 107 ntBASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Gm37153-201ENSMUST00000193637 231 ntBASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Trim30cD3YVI9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.1■□□□□ 0.17
Trim30cD3YVI9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim30cD3YVI9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim30cD3YVI9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim30cD3YVI9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim30cD3YVI9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim30cD3YVI9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trim30cD3YVI9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim30cD3YVI9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim30cD3YVI9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim30cD3YVI9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim30cD3YVI9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim30cD3YVI9 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.09■□□□□ 0.17
Trim30cD3YVI9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim30cD3YVI9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim30cD3YVI9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim30cD3YVI9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms