Protein–RNA interactions for Protein: Q9Z260

Cldn8, Claudin-8, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn8Q9Z260 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn8Q9Z260 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn8Q9Z260 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.02□□□□□ -0.17
Cldn8Q9Z260 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn8Q9Z260 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn8Q9Z260 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.02□□□□□ -0.17
Cldn8Q9Z260 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn8Q9Z260 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn8Q9Z260 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn8Q9Z260 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
Cldn8Q9Z260 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Gm13464-201ENSMUST00000119418 935 ntBASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Gm10819-201ENSMUST00000099988 561 ntBASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn8Q9Z260 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cldn8Q9Z260 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cldn8Q9Z260 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Cldn8Q9Z260 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Gm44443-201ENSMUST00000204396 5633 ntBASIC14□□□□□ -0.17
Cldn8Q9Z260 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Gm13884-201ENSMUST00000118103 829 ntBASIC14□□□□□ -0.17
Cldn8Q9Z260 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
Cldn8Q9Z260 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14□□□□□ -0.17
Cldn8Q9Z260 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14□□□□□ -0.17
Cldn8Q9Z260 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14□□□□□ -0.17
Cldn8Q9Z260 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cldn8Q9Z260 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Cldn8Q9Z260 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14□□□□□ -0.17
Cldn8Q9Z260 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cldn8Q9Z260 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Cldn8Q9Z260 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Cldn8Q9Z260 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn8Q9Z260 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn8Q9Z260 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn8Q9Z260 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn8Q9Z260 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn8Q9Z260 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cldn8Q9Z260 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn8Q9Z260 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn8Q9Z260 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn8Q9Z260 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn8Q9Z260 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn8Q9Z260 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.99□□□□□ -0.17
Cldn8Q9Z260 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn8Q9Z260 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cldn8Q9Z260 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn8Q9Z260 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn8Q9Z260 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms