Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm13453-201ENSMUST00000118708 357 ntBASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm27306-201ENSMUST00000183970 107 ntBASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Mir8102-201ENSMUST00000184148 139 ntBASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm18558-201ENSMUST00000186253 1214 ntBASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.02■□□□□ 0.16
Nr1h3Q9Z0Y9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Nr1h3Q9Z0Y9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nr1h3Q9Z0Y9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nr1h3Q9Z0Y9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.02■□□□□ 0.15
Nr1h3Q9Z0Y9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Nr1h3Q9Z0Y9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Nr1h3Q9Z0Y9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nr1h3Q9Z0Y9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nr1h3Q9Z0Y9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.02■□□□□ 0.15
Nr1h3Q9Z0Y9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Nr1h3Q9Z0Y9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm13223-201ENSMUST00000118609 747 ntBASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm25144-201ENSMUST00000179561 110 ntBASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm25352-201ENSMUST00000179815 110 ntBASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nr1h3Q9Z0Y9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nr1h3Q9Z0Y9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms