Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb3Q91XZ7 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb3Q91XZ7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Gm25116-201ENSMUST00000157191 122 ntBASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Gm7430-201ENSMUST00000193824 1144 ntBASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Gm44771-201ENSMUST00000206975 626 ntBASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb3Q91XZ7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb3Q91XZ7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb3Q91XZ7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb3Q91XZ7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms