Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rpp40Q8R1F9 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rpp40Q8R1F9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Mir449b-201ENSMUST00000104833 80 ntBASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rpp40Q8R1F9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Gm13015-201ENSMUST00000118674 204 ntBASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Gm7774-201ENSMUST00000200064 533 ntBASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Carlr-201ENSMUST00000181515 2574 ntBASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpp40Q8R1F9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms