Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Gm9726-201ENSMUST00000180321 678 ntBASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Gm2451-201ENSMUST00000199447 999 ntBASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Gm10290-201ENSMUST00000200451 999 ntBASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Rtn1Q8K0T0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rtn1Q8K0T0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rtn1Q8K0T0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rtn1Q8K0T0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rtn1Q8K0T0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rtn1Q8K0T0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Gm13323-201ENSMUST00000120245 1151 ntBASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtn1Q8K0T0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Gm45612-201ENSMUST00000211320 160 ntBASIC17■□□□□ 0.31
Rtn1Q8K0T0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 AC132104.2-201ENSMUST00000215011 266 ntBASIC17■□□□□ 0.31
Rtn1Q8K0T0 CT943659.1-201ENSMUST00000215459 326 ntBASIC17■□□□□ 0.31
Rtn1Q8K0T0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Gm11960-202ENSMUST00000181063 2858 ntBASIC17■□□□□ 0.31
Rtn1Q8K0T0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rtn1Q8K0T0 Nrn1-204ENSMUST00000224323 1779 ntBASIC17■□□□□ 0.31
Rtn1Q8K0T0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn1Q8K0T0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn1Q8K0T0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn1Q8K0T0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn1Q8K0T0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn1Q8K0T0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn1Q8K0T0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn1Q8K0T0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn1Q8K0T0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn1Q8K0T0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rtn1Q8K0T0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn1Q8K0T0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn1Q8K0T0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms