Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Gm27618-201ENSMUST00000183671 60 ntBASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Mir7023-201ENSMUST00000185093 64 ntBASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Gm18766-201ENSMUST00000189811 808 ntBASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Gm38294-201ENSMUST00000192831 381 ntBASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Gm20949-201ENSMUST00000206478 952 ntBASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rdh1Q8CGV4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh1Q8CGV4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Gm14057-201ENSMUST00000120631 482 ntBASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Gm9726-201ENSMUST00000180321 678 ntBASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rdh1Q8CGV4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Gm13223-201ENSMUST00000118609 747 ntBASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms