Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trim58Q5NCC9 Gm44981-201ENSMUST00000205549 1943 ntBASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Gm1401-201ENSMUST00000122048 772 ntBASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Gm27301-201ENSMUST00000184012 127 ntBASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Olfr286-202ENSMUST00000205305 969 ntBASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim58Q5NCC9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Gm9385-201ENSMUST00000117563 472 ntBASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim58Q5NCC9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Gm38058-201ENSMUST00000194323 4368 ntBASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim58Q5NCC9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Trim58Q5NCC9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trim58Q5NCC9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trim58Q5NCC9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim58Q5NCC9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim58Q5NCC9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim58Q5NCC9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.63■□□□□ 0.57
Trim58Q5NCC9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trim58Q5NCC9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms