Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdkn2bP55271 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cdkn2bP55271 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Cdkn2bP55271 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdkn2bP55271 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdkn2bP55271 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdkn2bP55271 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdkn2bP55271 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.15□□□□□ -0.14
Cdkn2bP55271 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cdkn2bP55271 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdkn2bP55271 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.15
Cdkn2bP55271 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.14□□□□□ -0.15
Cdkn2bP55271 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Gm7222-201ENSMUST00000117512 906 ntBASIC14.14□□□□□ -0.15
Cdkn2bP55271 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Gm7787-201ENSMUST00000216858 688 ntBASIC14.14□□□□□ -0.15
Cdkn2bP55271 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.14□□□□□ -0.15
Cdkn2bP55271 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.14□□□□□ -0.15
Cdkn2bP55271 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cdkn2bP55271 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Gm8749-201ENSMUST00000117737 331 ntBASIC14.13□□□□□ -0.15
Cdkn2bP55271 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.13□□□□□ -0.15
Cdkn2bP55271 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.13□□□□□ -0.15
Cdkn2bP55271 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Gm18246-201ENSMUST00000221023 728 ntBASIC14.13□□□□□ -0.15
Cdkn2bP55271 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.13□□□□□ -0.15
Cdkn2bP55271 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Cdkn2bP55271 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Cdkn2bP55271 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms