Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Xcl1P47993 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Xcl1P47993 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Xcl1P47993 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Xcl1P47993 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Xcl1P47993 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Xcl1P47993 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Xcl1P47993 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Xcl1P47993 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC9.6□□□□□ -0.87
Xcl1P47993 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Xcl1P47993 Gm43195-201ENSMUST00000200614 2332 ntBASIC9.6□□□□□ -0.87
Xcl1P47993 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC9.6□□□□□ -0.87
Xcl1P47993 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Xcl1P47993 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Xcl1P47993 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Xcl1P47993 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Xcl1P47993 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Carlr-201ENSMUST00000181515 2574 ntBASIC9.59□□□□□ -0.87
Xcl1P47993 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Gm42632-201ENSMUST00000201707 2411 ntBASIC9.59□□□□□ -0.87
Xcl1P47993 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Xcl1P47993 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Xcl1P47993 Gm7291-201ENSMUST00000199147 382 ntBASIC9.59□□□□□ -0.87
Xcl1P47993 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC9.59□□□□□ -0.87
Xcl1P47993 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Xcl1P47993 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC9.59□□□□□ -0.87
Xcl1P47993 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC9.59□□□□□ -0.87
Xcl1P47993 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Xcl1P47993 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Xcl1P47993 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Xcl1P47993 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Xcl1P47993 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Xcl1P47993 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Xcl1P47993 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Xcl1P47993 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Xcl1P47993 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC9.58□□□□□ -0.88
Xcl1P47993 Gm6257-201ENSMUST00000163864 910 ntBASIC9.58□□□□□ -0.88
Xcl1P47993 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Xcl1P47993 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC9.58□□□□□ -0.88
Xcl1P47993 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Xcl1P47993 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Xcl1P47993 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC9.58□□□□□ -0.88
Xcl1P47993 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Xcl1P47993 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Xcl1P47993 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Xcl1P47993 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Xcl1P47993 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Xcl1P47993 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC9.58□□□□□ -0.88
Xcl1P47993 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms