Protein–RNA interactions for Protein: P29037

Tbp, TATA-box-binding protein, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TbpP29037 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TbpP29037 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
TbpP29037 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.91□□□□□ -0.66
TbpP29037 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TbpP29037 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TbpP29037 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TbpP29037 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
TbpP29037 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TbpP29037 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TbpP29037 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TbpP29037 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.91□□□□□ -0.66
TbpP29037 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TbpP29037 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TbpP29037 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TbpP29037 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TbpP29037 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
TbpP29037 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
TbpP29037 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
TbpP29037 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.9□□□□□ -0.66
TbpP29037 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
TbpP29037 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.9□□□□□ -0.66
TbpP29037 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.9□□□□□ -0.66
TbpP29037 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
TbpP29037 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Gm19164-201ENSMUST00000210667 640 ntBASIC10.9□□□□□ -0.66
TbpP29037 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
TbpP29037 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.9□□□□□ -0.66
TbpP29037 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
TbpP29037 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.9□□□□□ -0.66
TbpP29037 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TbpP29037 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
TbpP29037 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
TbpP29037 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TbpP29037 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
TbpP29037 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
TbpP29037 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.89□□□□□ -0.67
TbpP29037 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
TbpP29037 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.89□□□□□ -0.67
TbpP29037 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.89□□□□□ -0.67
TbpP29037 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.89□□□□□ -0.67
TbpP29037 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.89□□□□□ -0.67
TbpP29037 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC10.89□□□□□ -0.67
TbpP29037 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.89□□□□□ -0.67
TbpP29037 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
TbpP29037 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.89□□□□□ -0.67
TbpP29037 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.89□□□□□ -0.67
TbpP29037 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.89□□□□□ -0.67
TbpP29037 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.89□□□□□ -0.67
TbpP29037 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
TbpP29037 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
TbpP29037 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TbpP29037 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.88□□□□□ -0.67
TbpP29037 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
TbpP29037 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TbpP29037 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TbpP29037 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TbpP29037 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
TbpP29037 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
TbpP29037 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TbpP29037 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TbpP29037 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC10.88□□□□□ -0.67
TbpP29037 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms