Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.11■□□□□ 0.33
Pde6aP27664 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6aP27664 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.11■□□□□ 0.33
Pde6aP27664 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.11■□□□□ 0.33
Pde6aP27664 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pde6aP27664 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.11■□□□□ 0.33
Pde6aP27664 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pde6aP27664 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6aP27664 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6aP27664 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.11■□□□□ 0.33
Pde6aP27664 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pde6aP27664 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.11■□□□□ 0.33
Pde6aP27664 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6aP27664 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pde6aP27664 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Gm11543-201ENSMUST00000120758 370 ntBASIC17.1■□□□□ 0.33
Pde6aP27664 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.1■□□□□ 0.33
Pde6aP27664 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Pde6aP27664 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pde6aP27664 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6aP27664 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.1■□□□□ 0.33
Pde6aP27664 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6aP27664 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pde6aP27664 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6aP27664 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6aP27664 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pde6aP27664 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6aP27664 Gm2810-201ENSMUST00000118681 990 ntBASIC17.09■□□□□ 0.33
Pde6aP27664 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.09■□□□□ 0.33
Pde6aP27664 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6aP27664 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6aP27664 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.09■□□□□ 0.33
Pde6aP27664 Gm44335-201ENSMUST00000196879 141 ntBASIC17.09■□□□□ 0.33
Pde6aP27664 Gm44297-201ENSMUST00000198304 141 ntBASIC17.09■□□□□ 0.33
Pde6aP27664 Gm44346-201ENSMUST00000198851 141 ntBASIC17.09■□□□□ 0.33
Pde6aP27664 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.09■□□□□ 0.33
Pde6aP27664 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6aP27664 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6aP27664 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6aP27664 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.09■□□□□ 0.33
Pde6aP27664 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pde6aP27664 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6aP27664 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.09■□□□□ 0.33
Pde6aP27664 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pde6aP27664 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6aP27664 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6aP27664 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6aP27664 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6aP27664 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6aP27664 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6aP27664 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6aP27664 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6aP27664 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.08■□□□□ 0.33
Pde6aP27664 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6aP27664 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6aP27664 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6aP27664 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.08■□□□□ 0.33
Pde6aP27664 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Pde6aP27664 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.08■□□□□ 0.32
Pde6aP27664 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.08■□□□□ 0.32
Pde6aP27664 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.08■□□□□ 0.32
Pde6aP27664 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Mir6990-201ENSMUST00000183724 91 ntBASIC17.08■□□□□ 0.32
Pde6aP27664 Gm45098-201ENSMUST00000207179 657 ntBASIC17.08■□□□□ 0.32
Pde6aP27664 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pde6aP27664 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6aP27664 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms