Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.32□□□□□ -0.44
Col8a2P25318 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col8a2P25318 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Mir449b-201ENSMUST00000104833 80 ntBASIC12.32□□□□□ -0.44
Col8a2P25318 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.32□□□□□ -0.44
Col8a2P25318 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col8a2P25318 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Col8a2P25318 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
Col8a2P25318 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.32□□□□□ -0.44
Col8a2P25318 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.32□□□□□ -0.44
Col8a2P25318 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.32□□□□□ -0.44
Col8a2P25318 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.32□□□□□ -0.44
Col8a2P25318 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col8a2P25318 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.32□□□□□ -0.44
Col8a2P25318 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.32□□□□□ -0.44
Col8a2P25318 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col8a2P25318 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col8a2P25318 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Col8a2P25318 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col8a2P25318 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.31□□□□□ -0.44
Col8a2P25318 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.31□□□□□ -0.44
Col8a2P25318 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Col8a2P25318 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.31□□□□□ -0.44
Col8a2P25318 Auts2-212ENSMUST00000178555 309 ntBASIC12.31□□□□□ -0.44
Col8a2P25318 Gm29541-201ENSMUST00000191351 678 ntBASIC12.31□□□□□ -0.44
Col8a2P25318 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.31□□□□□ -0.44
Col8a2P25318 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.31□□□□□ -0.44
Col8a2P25318 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Col8a2P25318 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col8a2P25318 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col8a2P25318 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col8a2P25318 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.31□□□□□ -0.44
Col8a2P25318 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.31□□□□□ -0.44
Col8a2P25318 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col8a2P25318 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Col8a2P25318 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Col8a2P25318 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Col8a2P25318 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Col8a2P25318 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.3□□□□□ -0.44
Col8a2P25318 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Col8a2P25318 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Gm7774-201ENSMUST00000200064 533 ntBASIC12.3□□□□□ -0.44
Col8a2P25318 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.3□□□□□ -0.44
Col8a2P25318 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.3□□□□□ -0.44
Col8a2P25318 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.3□□□□□ -0.44
Col8a2P25318 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.3□□□□□ -0.44
Col8a2P25318 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.3□□□□□ -0.44
Col8a2P25318 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms