Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh3P10287 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh3P10287 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh3P10287 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cdh3P10287 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdh3P10287 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdh3P10287 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.69□□□□□ -0.22
Cdh3P10287 Gm7862-201ENSMUST00000121461 292 ntBASIC13.69□□□□□ -0.22
Cdh3P10287 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cdh3P10287 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.69□□□□□ -0.22
Cdh3P10287 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cdh3P10287 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.69□□□□□ -0.22
Cdh3P10287 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cdh3P10287 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.69□□□□□ -0.22
Cdh3P10287 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdh3P10287 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cdh3P10287 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cdh3P10287 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh3P10287 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdh3P10287 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cdh3P10287 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.68□□□□□ -0.22
Cdh3P10287 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cdh3P10287 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdh3P10287 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cdh3P10287 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Cdh3P10287 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cdh3P10287 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdh3P10287 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.68□□□□□ -0.22
Cdh3P10287 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh3P10287 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.67□□□□□ -0.22
Cdh3P10287 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cdh3P10287 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.67□□□□□ -0.22
Cdh3P10287 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.67□□□□□ -0.22
Cdh3P10287 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdh3P10287 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Cdh3P10287 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Cdh3P10287 Gm19164-201ENSMUST00000210667 640 ntBASIC13.67□□□□□ -0.22
Cdh3P10287 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdh3P10287 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Cdh3P10287 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh3P10287 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms