Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.17□□□□□ -0.3
CcnkO88874 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CcnkO88874 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CcnkO88874 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.17□□□□□ -0.3
CcnkO88874 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.17□□□□□ -0.3
CcnkO88874 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
CcnkO88874 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
CcnkO88874 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcnkO88874 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CcnkO88874 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.16□□□□□ -0.3
CcnkO88874 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CcnkO88874 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.16□□□□□ -0.3
CcnkO88874 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.16□□□□□ -0.3
CcnkO88874 Gm4459-201ENSMUST00000118750 468 ntBASIC13.16□□□□□ -0.3
CcnkO88874 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.16□□□□□ -0.3
CcnkO88874 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.16□□□□□ -0.3
CcnkO88874 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.16□□□□□ -0.3
CcnkO88874 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Gm19164-201ENSMUST00000210667 640 ntBASIC13.16□□□□□ -0.3
CcnkO88874 Gm18622-201ENSMUST00000219361 595 ntBASIC13.16□□□□□ -0.3
CcnkO88874 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.16□□□□□ -0.3
CcnkO88874 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CcnkO88874 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.16□□□□□ -0.3
CcnkO88874 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.16□□□□□ -0.3
CcnkO88874 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
CcnkO88874 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CcnkO88874 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CcnkO88874 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CcnkO88874 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CcnkO88874 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CcnkO88874 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CcnkO88874 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Gm14722-201ENSMUST00000118943 689 ntBASIC13.15□□□□□ -0.3
CcnkO88874 Gm12644-201ENSMUST00000119935 606 ntBASIC13.15□□□□□ -0.3
CcnkO88874 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.15□□□□□ -0.3
CcnkO88874 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.15□□□□□ -0.3
CcnkO88874 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.15□□□□□ -0.3
CcnkO88874 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Gm7506-201ENSMUST00000207758 815 ntBASIC13.15□□□□□ -0.3
CcnkO88874 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CcnkO88874 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.15□□□□□ -0.3
CcnkO88874 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.15□□□□□ -0.3
CcnkO88874 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CcnkO88874 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CcnkO88874 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CcnkO88874 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CcnkO88874 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CcnkO88874 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CcnkO88874 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms